dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000127_2|CGC4
Gene ID: MGYG000000127_01363
Location and strand information: 462044 - 464515 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 4.8409
Protein molecular weight: 91811.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000127_2|CGC4
Gene ID: MGYG000000127_01364
Location and strand information: 464770 - 465228 (+)
Family: Sigma70_r2+Sigma70_r4
Protein type: STP
Protein description: RNA polymerase sigma factor YlaC

Gene clsuter ID: MGYG000000127_2|CGC4
Gene ID: MGYG000000127_01365
Location and strand information: 465225 - 465941 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000127_2|CGC4
Gene ID: MGYG000000127_01366
Location and strand information: 465926 - 466633 (+)
Family: 3.A.1.148.3
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YxlF

Gene clsuter ID: MGYG000000127_2|CGC4
Gene ID: MGYG000000127_01367
Location and strand information: 466626 - 467792 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000127_2|CGC4
Gene ID: MGYG000000127_01368
Location and strand information: 468068 - 469756 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000127_2|CGC4
Gene ID: MGYG000000127_01369
Location and strand information: 469827 - 472499 (-)
Family: GH106|GH0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7513
Protein molecular weight: 100739.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000127_2|CGC4
Gene ID: MGYG000000127_01370
Location and strand information: 472773 - 473669 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000127_2|CGC4
Gene ID: MGYG000000127_01371
Location and strand information: 473684 - 474637 (-)
Family: 3.A.1.1.32
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000127_01363	Beta-galactosidase BoGH2A	CAZyme	462044	464515	+	GH2
MGYG000000127_01364	RNA polymerase sigma factor YlaC	STP	464770	465228	+	Sigma70_r2\| Sigma70_r4
MGYG000000127_01365	hypothetical protein	null	465225	465941	+	No domain
MGYG000000127_01366	putative ABC transporter ATP-binding protein YxlF	TC	465926	466633	+	3.A.1.148.3
MGYG000000127_01367	hypothetical protein	null	466626	467792	+	ABC2_membrane_2
MGYG000000127_01368	hypothetical protein	null	468068	469756	+	AAA-ATPase_like\| PDDEXK_9
MGYG000000127_01369	hypothetical protein	CAZyme	469827	472499	-	GH106\| GH0
MGYG000000127_01370	L-arabinose transport system permease protein AraQ	TC	472773	473669	-	3.A.1.1.29
MGYG000000127_01371	putative multiple-sugar transport system permease YteP	TC	473684	474637	-	3.A.1.1.32
Protein ID	Protein Name	Type	Start	End	Strand	Signature